Laboratory for Control, Learning, and Systems Biology

tridiagonal systems

2019
  1. M. Margaliot, E.D. Sontag, "Revisiting totally positive differential systems: A tutorial and new results", Automatica, vol. 101, pp. 1-14, 2019. pdf
    Abstract

    A matrix is totally nonnegative (resp., totally positive) if all its minors are nonnegative (resp., positive). This paper draws connections between B. Schwarz's 1970 work on TN and TP matrices to Smillie's 1984 and Smith's 1991 work on stability of nonlinear tridiagonal cooperative systems, simplifying proofs in the later paper and suggesting new research questions.

2018
  1. M. Margaliot, E.D. Sontag, "Analysis of nonlinear tridiagonal cooperative systems using totally positive linear differential systems", In Proc. 2018 IEEE Conf. Decision and Control, pp. 3104-3109, 2018. pdf
    Abstract

    This is a conference version of "Revisiting totally positive differential systems: A tutorial and new results".

2010
  1. L. Wang, P. de Leenheer, E.D. Sontag, "Conditions for global stability of monotone tridiagonal systems with negative feedback", Systems and Control Letters, vol. 59, pp. 138-130, 2010. pdf
    Abstract

    This paper studies monotone tridiagonal systems with negative feedback. These systems possess the Poincaré-Bendixson property, which implies that, if orbits are bounded, if there is a unique steady state and this unique equilibrium is asymptotically stable, and if one can rule out periodic orbits, then the steady state is globally asymptotically stable. Different approaches are discussed to rule out period orbits. One is based on direct linearization, while the other uses the theory of second additive compound matrices. Among the examples that will illustrate our main theoretical results is the classical Goldbeter model of circadian rhythms.

2008
  1. D. Angeli, E.D. Sontag, "Oscillations in I/O monotone systems", IEEE Transactions on Circuits and Systems, Special Issue on Systems Biology, vol. 55, pp. 166-176, 2008. pdf
    Preprint version in arXiv q-bio.QM/0701018, 14 Jan 2007
    Abstract

    In this note, we show how certain properties of Goldbeter's 1995 model for circadian oscillations can be proved mathematically, using techniques from the recently developed theory of monotone systems with inputs and outputs. The theory establishes global asymptotic stability, and in particular no oscillations, if the rate of transcription is somewhat smaller than that assumed by Goldbeter, based on the application of a tight small gain condition. This stability persists even under arbitrary delays in the feedback loop. On the other hand, when the condition is violated a Poincare'-Bendixson result allows to conclude existence of oscillations, for sufficiently high delays.

  2. L. Wang, P. de Leenheer, E.D. Sontag, "Global stability for monotone tridiagonal systems with negative feedback", In Proc. IEEE Conf. Decision and Control, Cancun, Dec. 2008, pp. 4091-4096, 2008.
    Abstract

    Conference version of paper "Conditions for global stability of monotone tridiagonal systems with negative feedback"

2004
  1. D. Angeli, E.D. Sontag, "An analysis of a circadian model using the small-gain approach to monotone systems", In Proc.\ IEEE Conf.\ Decision and Control, Paradise Island, Bahamas, Dec.\ 2004, IEEE Publications, pp. 575–578, 2004. pdf
    Abstract

    We show how certain properties of Goldbeter's original 1995 model for circadian oscillations can be proved mathematically. We establish global asymptotic stability, and in particular no oscillations, if the rate of transcription is somewhat smaller than that assumed by Goldbeter, but, on the other hand, this stability persists even under arbitrary delays in the feedback loop. We are mainly interested in illustrating certain mathematical techniques, including the use of theorems concerning tridiagonal cooperative systems and the recently developed theory of monotone systems with inputs and outputs.