Laboratory for Control, Learning, and Systems Biology

Papers by L. Wang and E.D. Sontag

2010
  1. L. Wang, P. de Leenheer, E.D. Sontag, "Conditions for global stability of monotone tridiagonal systems with negative feedback", Systems and Control Letters, vol. 59, pp. 138-130, 2010. pdf
    Abstract

    This paper studies monotone tridiagonal systems with negative feedback. These systems possess the Poincaré-Bendixson property, which implies that, if orbits are bounded, if there is a unique steady state and this unique equilibrium is asymptotically stable, and if one can rule out periodic orbits, then the steady state is globally asymptotically stable. Different approaches are discussed to rule out period orbits. One is based on direct linearization, while the other uses the theory of second additive compound matrices. Among the examples that will illustrate our main theoretical results is the classical Goldbeter model of circadian rhythms.

2008
  1. L. Wang, P. de Leenheer, E.D. Sontag, "Global stability for monotone tridiagonal systems with negative feedback", In Proc. IEEE Conf. Decision and Control, Cancun, Dec. 2008, pp. 4091-4096, 2008.
    Abstract

    Conference version of paper "Conditions for global stability of monotone tridiagonal systems with negative feedback"

  2. L. Wang, E.D. Sontag, "Singularly perturbed monotone systems and an application to double phosphorylation cycles", J. Nonlinear Science, vol. 18, pp. 527-550, 2008. pdf
    Abstract

    The theory of monotone dynamical systems has been found very useful in the modeling of some gene, protein, and signaling networks. In monotone systems, every net feedback loop is positive. On the other hand, negative feedback loops are important features of many systems, since they are required for adaptation and precision. This paper shows that, provided that these negative loops act at a comparatively fast time scale, the main dynamical property of (strongly) monotone systems, convergence to steady states, is still valid. An application is worked out to a double-phosphorylation "futile cycle" motif which plays a central role in eukaryotic cell signaling The workis heavily based on Fenichel-Jones geometric singular perturbation theory.

  3. L. Wang, E.D. Sontag, "On the number of steady states in a multiple futile cycle", Journal of Mathematical Biology, vol. 57, pp. 29-52, 2008. pdf
    Abstract

    This note studies the number of positive steady states in biomolecular reactions consisting of activation/deactivation futile cycles, such as those arising from phosphorylations and dephosphorylations at each level of a MAPK cascade. It is shown that: (1) for some parameter ranges, there are at least n+1 (if n is even) or n (if n is odd) steady states; (2) there never are more than 2n-1 steady states (so, for n=2, there are no more than 3 steady states); (3) for parameters near the standard Michaelis-Menten quasi-steady state conditions, there are at most n+1 steady states; and (4) for parameters far from the standard Michaelis-Menten quasi-steady state conditions, there is at most one steady state.

2007
  1. L. Wang, E.D. Sontag, "Further results on singularly perturbed monotone systems, with an application to double phosphorylation cycles", In Proc.\ IEEE Conf.\ Decision and Control, New Orleans, Dec.\ 2007, pp. 627-632, 2007.
    Conference version of "Singularly perturbed monotone systems and an application to double phosphorylation cycles".
2006
  1. L. Wang, E.D. Sontag, "Almost global convergence in singular perturbations of strongly monotone systems", In Positive Systems, pp. 415–422, 2006. doipdf
    (Lecture Notes in Control and Information Sciences Volume 341, Proceedings of the second Multidisciplinary International Symposium on Positive Systems: Theory and Applications (POSTA 06) Grenoble, France)
    Abstract

    This paper deals with global convergence to equilibria, and in particular Hirsch's generic convergence theorem for strongly monotone systems, for singular perturbations of monotone systems.

  2. L. Wang, E.D. Sontag, "A remark on singular perturbations of strongly monotone systems", In Proc.\ IEEE Conf.\ Decision and Control, San Diego, Dec.\ 2006, pp. 989-994, 2006. pdf
    Abstract

    This paper deals with global convergence to equilibria, and in particular Hirsch's generic convergence theorem for strongly monotone systems, for singular perturbations of monotone systems.