Laboratory for Control, Learning, and Systems Biology

Papers by A.L. Williams and E.D. Sontag

2021
  1. A.L. Williams, J.E. Fitzgerald, F. Ivich, E.D. Sontag, M. Niedre, "Comment on "In vivo flow cytometry reveals a circadian rhythm of circulating tumor cells"", npg Light: Science & Applications, vol. 10, pp. 188, 2021. pdf
    Abstract

    Correspondence regarding circulating tumor cell detection

2020
  1. A.L. Williams, J.E. Fitzgerald, F. Ivich, E.D. Sontag, M. Niedre, "Short-term circulating tumor cell dynamics in mouse xenograft models and implications for liquid biopsy", Frontiers in Oncology, vol. 10, pp. 2447-, 2020. doipdf
    Abstract

    Circulating tumor cells (CTCs) are widely studied using liquid biopsy methods that analyze single, fractionally-small peripheral blood (PB) samples. However, little is known about fluctuations in CTC numbers that occur over short timescales in vivo, and how these may affect accurate enumeration from blood samples. Diffuse in vivo flow cytometry (DiFC) developed by the Niedre lab allows continuous, non-invasive counting of rare, green fluorescent protein expressing CTCs in large deeply-seated blood vessels in mice. Here, DiFC is used to study short-term changes in CTC numbers in multiple myeloma and Lewis lung carcinoma xenograft models. Both 35- to 50-minute data sets are analyzed, with intervals corresponding to approximately 1, 5, 10 and 20% of the PB volume, as well as changes over 24-hour periods. For rare CTCs, the use of short DiFC intervals (corresponding to small PB samples) frequently resulted in no detections. For more abundant CTCs, CTC numbers frequently varied by an order of magnitude or more over the time-scales considered. This variability far exceeded that expected by Poisson statistics, and instead was consistent with rapidly changing mean numbers of CTCs in the PB. Because of these natural temporal changes, accurately enumerating CTCs from fractionally small blood samples is inherently problematic. The problem is likely to be compounded for multicellular CTC clusters or specific CTC subtypes. However, it is also shown that enumeration can be improved by averaging multiple samples, analysis of larger volumes, or development of new methods for enumeration of CTCs directly in vivo.